If you want to use JQuery Mobile, you will need to disable the Ajax loading system as AppDeck offers a native implementation for this.
Warning, JQuery Mobile is a big library. For maximum performance, if you don't need it don't use it.
Most Mobile browsers can understand special js/css/meta listed here. This solution will help you offering a better user experience:
Disable phone number detection
For more information, click here: Safari: Supported Meta Tags
Better screen handling
Viewport meta is the key for a good screen handling:
For more information, click here : Safari: Configuring the Viewport